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"16S rDNA"

Brief Communications

Molecular characterization of tick genera Haemaphysalis, Ixodes, and Amblyomma in Korea
Subin Lee, Badriah Alkathiri, Kyu-Sung Ahn, Jiwon Kim, So Youn Youn, Mi-Sun Yoo, Hyang-Sim Lee, Jae-Myung Kim, Dongmi Kwak, Sung Shik Shin, Seung-Hun Lee
Parasites Hosts Dis 2025;63(3):272-277.
Published online August 20, 2025
DOI: https://doi.org/10.3347/PHD.25035
Ticks are important ectoparasites that serve as key vectors of various pathogens, posing significant risks to both human and animal health. In this study, 3 genera and 5 species of ticks, including Haemaphysalis longicornis, H. flava, H. doenitzi, Ixodes nipponensis, and Amblyomma testudinarium, were analyzed both morphologically and molecularly. Morphological identification was conducted using established taxonomic keys, followed by molecular characterization through analysis of complete cytochrome c oxidase subunit 1 (cox1, 1,539 bp) and mitochondrial 16S rDNA (1,191–1,215 bp), and nuclear 18S rDNA (1,812–1,816 bp). Phylogenetic and pairwise distance analyses demonstrated that all 3 genes were effective for genus identification; cox1 and mitochondrial 16S rDNA were more effective than 18S rDNA in species identification. Additionally, this study is the first to identify H. doenitzi in the Korean mainland via molecular characterization. These results may serve as reference data for the molecular identification of tick species.
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Anaplasma marginale and A. platys Characterized from Dairy and Indigenous Cattle and Dogs in Northern Vietnam
Nguyen Thi Hong Chien, Thi Lan Nguyen, Khanh Linh Bui, Tho Van Nguyen, Thanh Hoa Le
Korean J Parasitol 2019;57(1):43-47.
Published online February 26, 2019
DOI: https://doi.org/10.3347/kjp.2019.57.1.43
Anaplasma marginale and A. platys were detected and characterized (16S rDNA sequence analysis) from dairy and indigenous cattle, and the latter in domestic dogs in Vietnam. A phylogenetic tree was inferred from 26 representative strains/species of Anaplasma spp. including 10 new sequences from Vietnam. Seven of our Vietnamese sequences fell into the clade of A. marginale and 3 into A. platys, with strong nodal support of 99 and 90%, respectively. Low genetic distances (0.2-0.4%) within each species supported the identification. Anaplasma platys is able to infect humans. Our discovery of this species in cattle and domestic dogs raises considerable concern about zoonotic transmission in Vietnam. Further systematic investigations are needed to gain data for Anaplasma spp. and members of Anaplasmataceae in animal hosts, vectors and humans across Vietnam.

Citations

Citations to this article as recorded by  Crossref logo
  • Molecular detection and genetic diversity of Anaplasma and Ehrlichia species in livestock and dogs in Pakistan
    Mughees Aizaz Alvi, Talha Javaid, Abu Bakar Yameen, Fakiha Asghar, Aliza Ali, Iqra Zaheer, Yousef Abdal Jalil Fadladdin, Hong-Bin Yan, Wan-Zhong Jia, Muhammad Saqib, Li Li
    Acta Tropica.2025; 268: 107700.     CrossRef
  • Isolation, Molecular Characterization and In Vitro Propagation of an Anaplasma platys-Like Bacterium in Tick Cells
    Erica Rodrigues de Matos, Priscilla Nunes dos Santos, Erich Peter Zweygarth, Talys Henrique Assumpção Jardim, Huarrisson Azevedo Santos, Matheus Dias Cordeiro, Bruna de Azevedo Baêta, Lesley Bell-Sakyi, Adivaldo Henrique da Fonseca, Claudia Bezerra da Sil
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  • Tick distribution and comparative analysis of bovine blood microbiome in two provinces of South Africa using 16S rRNA PacBio sequencing approach
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    Frontiers in Tropical Diseases.2024;[Epub]     CrossRef
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    Madina Kadyrova, Alexandr Ostrovskii, Kassym Mukanov, Amirkhan Kassen, Elena Shevtsova, Maxat Berdikulov, Gilles Vergnaud, Alexandr Shevtsov
    Pathogens.2024; 13(10): 894.     CrossRef
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    Carlo Andrea Cossu, Sunday Ochonu Ochai, Milana Troskie, Axel Hartmann, Jacques Godfroid, Lin-Mari de Klerk, Wendy Turner, Pauline Kamath, Ockert Louis van Schalkwyk, Rudi Cassini, Raksha Bhoora, Henriette van Heerden, Nan-Hua Chen
    Transboundary and Emerging Diseases.2024;[Epub]     CrossRef
  • Dynamics of Infections in Cattle and Rhipicephalus microplus: A Preliminary Study
    Elianne Piloto-Sardiñas, Angélique Foucault-Simonin, Alejandra Wu-Chuang, Lourdes Mateos-Hernández, Roxana Marrero-Perera, Lianet Abuin-Denis, Lisset Roblejo-Arias, Cristian Díaz-Corona, Zbigniew Zając, Joanna Kulisz, Aneta Woźniak, Sara Moutailler, Belki
    Pathogens.2023; 12(8): 998.     CrossRef
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    Joshua Kamani, Juliane Schaer, Ali G. Umar, James Y. Pilarshimwi, Laminu Bukar, Javier González-Miguel, Shimon Harrus
    Ticks and Tick-borne Diseases.2022; 13(4): 101955.     CrossRef
  • Genetic diversity of Anaplasma marginale in calves with anaplasmosis on farms in Minas Gerais, Brazil
    Michele Bahia, Lucas Teixeira da Silva, Bruno Montijo da Silva, Matheus dias Cordeiro, Alexandro Guterres, Claudia Bezerra da Silva, Jenevaldo Barbosa da Silva, Adivaldo Henrique Fonseca
    Ticks and Tick-borne Diseases.2021; 12(1): 101552.     CrossRef
  • Comparison of Anaplasma and Ehrlichia species–specific peptide ELISAs with whole organism–based immunofluorescent assays for serologic diagnosis of anaplasmosis and ehrlichiosis in dogs
    Barbara A. Qurollo, Brett A. Stillman, Melissa J. Beall, Paulette Foster, Barbara C. Hegarty, Edward B. Breitschwerdt, Ramaswamy Chandrashekar
    American Journal of Veterinary Research.2021; 82(1): 71.     CrossRef
  • Canine and feline vector-borne diseases of zoonotic concern in Southeast Asia
    Viet-Linh Nguyen, Filipe Dantas-Torres, Domenico Otranto
    Current Research in Parasitology & Vector-Borne Diseases.2021; 1: 100001.     CrossRef
  • Molecular detection of selected tick-borne pathogens infecting cattle at the wildlife–livestock interface of Queen Elizabeth National Park in Kasese District, Uganda
    Benedicto Byamukama, Patrick Vudriko, Maria Agnes Tumwebaze, Dickson Stuart Tayebwa, Joseph Byaruhanga, Martin Kamilo Angwe, Jixu Li, Eloiza May Galon, Aaron Ringo, Mingming Liu, Yongchang Li, Shengwei Ji, Mohamed Abdo Rizk, Paul Frank Adjou Moumouni, Seu
    Ticks and Tick-borne Diseases.2021; 12(5): 101772.     CrossRef
  • Molecular detection of Theileria species, Anaplasma species, Candidatus Mycoplasma haemobos, Trypanosoma evansi and first evidence of Theileria sinensis-associated bovine anaemia in crossbred Kedah-Kelantan x Brahman cattle
    Onyinyechukwu Ada Agina, Mohd Rosly Shaari, Nur Mahiza Md Isa, Mokrish Ajat, Mohd Zamri-Saad, Mazlina Mazlan, Azim Salahuddin Muhamad, Afrah Alhana Kassim, Lee Chai Ha, Fairuz Hazwani Rusli, Darulmuqaamah Masaud, Hazilawati Hamzah
    BMC Veterinary Research.2021;[Epub]     CrossRef
  • Morphological, molecular and MALDI-TOF MS identification of ticks and tick-associated pathogens in Vietnam
    Ly Na Huynh, Adama Zan Diarra, Quang Luan Pham, Nhiem Le-Viet, Jean-Michel Berenger, Van Hoang Ho, Xuan Quang Nguyen, Philippe Parola, Lynn Soong
    PLOS Neglected Tropical Diseases.2021; 15(9): e0009813.     CrossRef
  • The co-infection with Ehrlichia minasensis, Anaplasma marginale and Anaplasma platys is not associated with anemia in beef cattle in the Brazilian Pantanal
    Marcos Rogério André, Ana Cláudia Calchi, Heitor Miraglia Herrera, Diego Carlos de Souza Zanatto, Bruna de Carvalho Le Senéchal Horta, Júlia Banhareli Tasso, Inalda Angélica de Souza Ramos, Victória Valente Califre de Mello, Rosangela Zacarias Machado
    Veterinary Parasitology: Regional Studies and Reports.2020; 21: 100437.     CrossRef
  • Molecular detection and genetic characterization of Anaplasma marginale and Anaplasma platys-like (Rickettsiales: Anaplasmataceae) in water buffalo from eight provinces of Thailand
    Anh H. L. Nguyen, Sonthaya Tiawsirisup, Morakot Kaewthamasorn
    BMC Veterinary Research.2020;[Epub]     CrossRef
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Original Article
Molecular characterization of bacterial endosymbionts of Acanthamoeba isolates from infected corneas of Korean patients
Ying-Hua Xuan, Hak Sun Yu, Hae Jin Jeong, Sung-Yong Seol, Dong-Il Chung, Hyun-Hee Kong
Korean J Parasitol 2007;45(1):1-9.
Published online March 20, 2007
DOI: https://doi.org/10.3347/kjp.2007.45.1.1

The endosymbionts of 4 strains of Acanthamoeba (KA/E9, KA/E21, KA/E22, and KA/E23) isolated from the infected corneas of Korean patients were characterized via orcein stain, transmission electron microscopic examination, and 16S rDNA sequence analysis. Double membrane-bound, rod-shaped endosymbionts were distributed randomly throughout both the trophozoites and cysts of each of Acanthamoeba isolates. The endosymbionts of KA/E9, KA/E22, and KA/E23 were surrounded by electron-translucent areas. No lacunae-like structures were observed in the endosymbionts of KA/E21, the bacterial cell walls of which were studded with host ribosomes. Comparative analyses of the 16S rDNA sequences showed that the endosymbionts of KA/E9, KA/E22 and KA/E23 were closely related to Caedibacter caryophilus, whereas the KA/E21 endosymbiont was assigned to the Cytophaga-Flavobacterium-Bacteroides (CFB) phylum. In the 4 strains of Acanthamoeba, the hosts of the endosymbionts were identified as belonging to the Acanthamoeba castellanii complex, which corresponds to the T4 genotype. Acanthamoeba KA/E21 evidenced characteristics almost identical to those of KA/E6, with the exception of the existence of endosymbionts. The discovery of these endosymbionts from Acanthamoeba may prove essential to future studies focusing on interactions between the endosymbionts and the amoebic hosts.

Citations

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  • Proteases of Acanthamoeba
    Behroz Mahdavi Poor, Jalil Rashedi, Vahid Asgharzadeh, Amirali Mirmazhary, Nazila Gheitarani
    Parasitology Research.2024;[Epub]     CrossRef
  • Presence and diversity of free-living amoebae and their potential application as water quality indicators
    Areum Choi, Ji Won Seong, Jeong Hyun Kim, Jun Young Lee, Hyun Jae Cho, Shin Ae Kang, Mi Kyung Park, Mi Jin Jeong, Seo Yeong Choi, Yu Jin Jeong, Hak Sun Yu
    Parasites, Hosts and Diseases.2024; 62(2): 180.     CrossRef
  • Contamination of fresh vegetables in municipal stores with pathogenic Acanthamoeba genotypes; a public health concern
    Marziye Fatemi, Maryam Niyyati, Soheila Rouhani, Seyed Ahmad Karamati, Hamed Mirjalali, Panagiotis Karanis
    International Journal of Environmental Health Research.2023; 33(10): 1010.     CrossRef
  • The life cycle-dependent transcriptional profile of the obligate intracellular amoeba symbiontAmoebophilus asiaticus
    E Selberherr, T Penz, L König, B Conrady, A Siegl, M Horn, S Schmitz-Esser
    FEMS Microbiology Ecology.2022;[Epub]     CrossRef
  • A Systematic Review of Intracellular Microorganisms within Acanthamoeba to Understand Potential Impact for Infection
    Binod Rayamajhee, Dinesh Subedi, Hari Kumar Peguda, Mark Duncan Willcox, Fiona L. Henriquez, Nicole Carnt
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