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"18s rDNA sequence analysis"

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"18s rDNA sequence analysis"

Original Articles
Molecular characterization of Acanthamoeba isolated from amebic keratitis related to orthokeratology lens overnight wear
Sun Joo Lee, Hae Jin Jeong, Ji Eun Lee, Jong Soo Lee, Ying Hua Xuan, Hyun-Hee Kong, Dong-Il Chung, Mee-Sun Ock, Hak Sun Yu
Korean J Parasitol 2006;44(4):313-320.
Published online December 20, 2006
DOI: https://doi.org/10.3347/kjp.2006.44.4.313

In an effort to characterize, on the molecular scale, the Acanthamoeba initially isolated from the cornea of an amoebic keratitis patient associated with overnight-wear orthokeratology lens in Korea, we conducted mitochondrial DNA restriction fragment length polymorphism, 18S rDNA sequencing, and drug sensitivity analyses on the isolate (KA/PE1). The patient was treated with polyhexamethylene biguanide, chlorhexidine and oral itraconazole, which resulted in resolution of the patient's ocular inflammation. The majority of the molecular characteristics of the KA/PE1 were determined to be identical, or quite similar, to those of A. castellanii Ma strain, which had been isolated also from amoebic keratitis. The risk of Acanthamoeba keratitis as a potential complication of overnight orthokeratology is briefly discussed.

Citations

Citations to this article as recorded by  Crossref logo
  • Free-Living Amoeba Vermamoeba vermiformis Induces Allergic Airway Inflammation
    Da-In Lee, Sung Hee Park, Shin-Ae Kang, Do Hyun Kim, Sun Hyun Kim, So Yeon Song, Sang Eun Lee, Hak Sun Yu
    The Korean Journal of Parasitology.2022; 60(4): 229.     CrossRef
  • Orthokeratology lens-related Acanthamoeba keratitis: case report and analytical review
    Jinfang Wu, Huatao Xie
    Journal of International Medical Research.2021;[Epub]     CrossRef
  • Infectious keratitis and orthokeratology lens use: a systematic review
    Ka Wai Kam, Wing Yung, Gabriel Ka Hin Li, Li Jia Chen, Alvin L. Young
    Infection.2017; 45(6): 727.     CrossRef
  • The Role of Ultraviolet Radiation in the Ocular System of Mammals
    Mercede Majdi, Behrad Milani, Asadolah Movahedan, Lisa Wasielewski, Ali Djalilian
    Photonics.2014; 1(4): 347.     CrossRef
  • Orthokeratology lens related infections
    Kelvin Ho-Nam Wan
    World Journal of Ophthalmology.2014; 4(3): 63.     CrossRef
  • Riboflavin and Ultraviolet Light A Therapy as an Adjuvant Treatment for Medically Refractive Acanthamoeba Keratitis
    Yasin A. Khan, Renata T. Kashiwabuchi, Suy Anne Martins, Juan M. Castro-Combs, Sachin Kalyani, Philip Stanley, David Flikier, Ashley Behrens
    Ophthalmology.2011; 118(2): 324.     CrossRef
  • Bilateral Acanthamoeba Keratitis After Orthokeratology
    Eun Chul Kim, Man Soo Kim
    Cornea.2010; 29(6): 680.     CrossRef
  • Twenty Years of Acanthamoeba Keratitis
    F R S Carvalho, A S Foronda, M J Mannis, A L Höfling-Lima, R Belfort, Denise de Freitas
    Cornea.2009; 28(5): 516.     CrossRef
  • Molecular Phylogeny of Acanthamoeba
    Hyun Hee Kong
    The Korean Journal of Parasitology.2009; 47(Suppl): S21.     CrossRef
  • Bilateral Acanthamoeba Keratitis After Orthokeratology
    Eun Chul Kim, Man Soo Kim
    Cornea.2009; 28(3): 348.     CrossRef
  • Trends in Microbial Keratitis Associated With Orthokeratology
    Kathleen G. Watt, Helen A. Swarbrick
    Eye & Contact Lens: Science & Clinical Practice.2007; 33(6): 373.     CrossRef
  • 14,068 View
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Evaluation of taxonomic validity of four species of Acanthamoeba: A. divionensis, A. paradivionensis, A. mauritaniensis, and A. rhysodes, inferred from molecular analyses
Hua Liu, Eun-Kyung Moon, Hak-Sun Yu, Hae-Jin Jeong, Yeon-Chul Hong, Hyun-Hee Kong, Dong-Il Chung
Korean J Parasitol 2005;43(1):7-13.
Published online March 20, 2005
DOI: https://doi.org/10.3347/kjp.2005.43.1.7

The taxonomy of Acanthamoeba spp., an amphizoic amoeba which causes granulomatous amoebic encephalitis and chronic amoebic keratitis, has been revised many times. The taxonomic validity of some species has yet to be assessed. In this paper, we analyzed the morphological characteristics, nuclear 18s rDNA and mitochondrial 16s rDNA sequences and the Mt DNA RFLP of the type strains of four Acanthamoeba species, which had been previously designated as A. divionensis, A. parasidionensis, A. mauritaniensis, and A. rhysodes. The four isolates revealed characteristic group II morphology. They exhibited 18S rDNA sequence differences of 0.2-1.1% with each other, but more than 2% difference from the other compared reference strains. Four isolates formed a different clade from that of A. castellanii Castellani and the other strains in morphological group II on the phylogenetic tree. In light of these results, A. paradivionensis, A. divionensis, and A. mauritaniensis should be regarded as synonyms for A. rhysodes.

Citations

Citations to this article as recorded by  Crossref logo
  • The Status of Molecular Analyses of Isolates of Acanthamoeba Maintained by International Culture Collections
    Paul A. Fuerst
    Microorganisms.2023; 11(2): 295.     CrossRef
  • On the diversity and clinical importance of Acanthamoeba spp. from Group 1
    Daniele Corsaro
    Parasitology Research.2021; 120(6): 2057.     CrossRef
  • Isolates from ancient permafrost help to elucidate species boundaries in Acanthamoeba castellanii complex (Amoebozoa: Discosea)
    Stas Malavin, Lyubov Shmakova
    European Journal of Protistology.2020; 73: 125671.     CrossRef
  • Update on Acanthamoeba phylogeny
    Daniele Corsaro
    Parasitology Research.2020; 119(10): 3327.     CrossRef
  • Genetic Characterization of Clinical Acanthamoeba Isolates from Japan using Nuclear and Mitochondrial Small Subunit Ribosomal RNA
    Md Moshiur Rahman, Kenji Yagita, Akira Kobayashi, Yosaburo Oikawa, Amjad I.A. Hussein, Takahiro Matsumura, Masaharu Tokoro
    The Korean Journal of Parasitology.2013; 51(4): 401.     CrossRef
  • Isolation and characterization of Acanthamoeba spp. from air-conditioners in Kuala Lumpur, Malaysia
    Li-Li Chan, Joon-Wah Mak, Yoon-Tong Low, Thuan-Tzen Koh, Init Ithoi, Shar Mariam Mohamed
    Acta Tropica.2011; 117(1): 23.     CrossRef
  • Keratitis by Acanthamoeba triangularis: Report of Cases and Characterization of Isolates
    Ying-Hua Xuan, Byung-Suk Chung, Yeon-Chul Hong, Hyun-Hee Kong, Tae-Won Hahn, Dong-Il Chung
    The Korean Journal of Parasitology.2008; 46(3): 157.     CrossRef
  • Acanthamoeba keratitis due to Acanthamoeba genotype T4 in a non-contact-lens wearer in Turkey
    Hatice Ertabaklar, Meral Türk, Volkan Dayanir, Sema Ertuğ, Julia Walochnik
    Parasitology Research.2007; 100(2): 241.     CrossRef
  • 8,783 View
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