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"LAMP assay"

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"LAMP assay"

Original Article

Development and validation of a species-specific loop-mediated isothermal amplification assay for rapid detection of Perkinsus marinus
S.D.N.K. Bathige, Seung-Hyeon Kim, Donghyun Lee, Hyung-Bae Jeon, Yu Chen, Kyung-Il Park
Received September 24, 2025  Accepted October 29, 2025  Published online January 26, 2026  
DOI: https://doi.org/10.3347/PHD.25083    [Epub ahead of print]
Perkinsus marinusis a major protozoan pathogen of oysters, responsible for severe mortality events and substantial economic losses in the global aquaculture industry. Rapid, sensitive, and reliable detection of this parasite is therefore essential for effective monitoring and timely control of dermo disease outbreaks. In this study, we developed and optimized a novel loop-mediated isothermal amplification (LAMP) assay, designated Pm-LAMP, for the specific detection of P. marinus in oyster tissues. The optimized Pm-LAMP assay, employing 5 primers and performed at 67°C, demonstrated high analytical sensitivity, consistently detecting DNA concentrations as low as 40 fg/µl and enabling accurate quantification down to 0.4 pg/µl. The assay exhibited linear amplification across a wide template range from 4 ng/µl to 0.4 pg/µl, with a strong inverse correlation between template concentration and threshold time. Specificity testing confirmed exclusive amplification of P. marinus, with no cross-reactivity observed for P. olseni, P. honshuensis, or P. chesapeaki. This study represents the first LAMP assay specifically designed for the detection of P. marinus. The Pm-LAMP assay was validated using Pacific oyster tissues and cultured P. marinusisolates originating from the USA and Korea and was benchmarked against quantitative real-time PCR (qPCR). Although qPCR exhibited higher sensitivity for detecting trace DNA levels, the Pm-LAMP assay produced results within 20 min while maintaining reliable detection at low DNA concentrations. Diagnostic performance evaluation showed 100% sensitivity and 90.91% specificity, with substantial agreement with qPCR (Cohen’s κ=0.811). Overall, the Pm-LAMP assay provides a rapid, robust, and field-deployable diagnostic tool for P. marinus, supporting improved disease surveillance and sustainable oyster aquaculture management.
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Brief Communication
Recent Situation of Taeniasis in Mongolia (2002-2012)
Anu Davaasuren, Temuulen Dorjsuren, Tetsuya Yanagida, Yasuhito Sako, Kazuhiro Nakaya, Abmed Davaajav, Gurbadam Agvaandaram, Tsatsral Enkhbat, Battsetseg Gonchigoo, Nyamkhuu Dulmaa, Gantigmaa Chuluunbaatar, Akira Ito
Korean J Parasitol 2014;52(2):211-214.
Published online April 18, 2014
DOI: https://doi.org/10.3347/kjp.2014.52.2.211

Epidemiological situation of taeniasis in Mongolia was assessed based on mitochondrial DNA identification of the parasite species. Multiplex PCR was used on a total of 194 proglottid specimens of Taenia species and copro-PCR and loop-mediated isothermal amplification (LAMP) assays were utilized for detection of copro-DNA of 37 fecal samples from taeniasis patients submitted to the Mongolian National Center for Communicable Diseases (NCCD) from 2002 to 2012. In addition, 4 out of 44 calcified cysts in beef kept in formalin since 2003 were evaluated for histopathological confirmation of cattle cysticercosis. All proglottid specimens and stool samples were confirmed to be Taenia saginata by multiplex PCR and by copro-PCR and LAMP, respectively. Cysts collected from cattle were morphologically confirmed to be metacestodes of Taenia species. T. saginata taeniasis was identified from almost all ages from a 2-year-old boy up to a 88-year-old woman and most prominently in 15-29 age group (37%, 74/198) followed by 30-44 age group (34.8%, 69/198 ) from 15 of Mongolia's 21 provinces, while cattle cysticerci were found from 12 provinces. The highest proportion of taeniasis patients was in Ulaanbaatar, the capital of Mongolia.

Citations

Citations to this article as recorded by  Crossref logo
  • Comparison of mitochondrial genetic variation of Taenia hydatigena cysticerci from China and Mongolia
    Sayed Ajmal Qurishi, Hong-Bin Yan, Li Li, John Aeskhaen Ohiolei, Mughees Aizaz Alvi, Lin-Sheng Zhang, Ha Da, Hong-Mei Qiao, Nigus Abebe Shumuye, Bao Hua, Bing-Xin Bai, Wen-Jun Tian, Ju-Mei Xu, Bao-Quan Fu, Wan-Zhong Jia
    Parasitology Research.2022; 121(12): 3455.     CrossRef
  • Prevalence of meat-transmitted Taenia and Trichinella parasites in the Far East countries
    Yi Liu, Zijian Dong, Jianda Pang, Mingyuan Liu, Xuemin Jin
    Parasitology Research.2021; 120(12): 4145.     CrossRef
  • Epidemiology of Taenia saginata taeniosis/cysticercosis: a systematic review of the distribution in East, Southeast and South Asia
    Ramon M. Eichenberger, Lian F. Thomas, Sarah Gabriël, Branco Bobić, Brecht Devleesschauwer, Lucy J. Robertson, Anastasios Saratsis, Paul R. Torgerson, Uffe C. Braae, Veronique Dermauw, Pierre Dorny
    Parasites & Vectors.2020;[Epub]     CrossRef
  • Detection of helminths by loop-mediated isothermal amplification assay: a review of updated technology and future outlook
    Miao-Han Deng, Lan-Yi Zhong, Okanurak Kamolnetr, Yanin Limpanont, Zhi-Yue Lv
    Infectious Diseases of Poverty.2019;[Epub]     CrossRef
  • Taeniasis and cysticercosis in Asia: A review with emphasis on molecular approaches and local lifestyles
    Akira Ito, Tiaoying Li, Toni Wandra, Paron Dekumyoy, Tetsuya Yanagida, Munehiro Okamoto, Christine M Budke
    Acta Tropica.2019; 198: 105075.     CrossRef
  • Neurocysticercosis: A case study of a Mongolian traveler who visited China and India with an updated review in Asia
    Anu Davaasuren, Abmed Davaajav, Baigalmaa Ukhnaa, Altantsetseg Purvee, Saraa Unurkhaan, Amartuvshin Luvsan, Jenae E. Logan, Akira Ito
    Travel Medicine and Infectious Disease.2017; 20: 31.     CrossRef
  • Novel approaches to the diagnosis of Strongyloides stercoralis infection
    D. Buonfrate, F. Formenti, F. Perandin, Z. Bisoffi
    Clinical Microbiology and Infection.2015; 21(6): 543.     CrossRef
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