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"random amplified polymorphic DNA technique"

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"random amplified polymorphic DNA technique"

Original Article
PCR-RFLP patterns of four isolates of Trichinella for rDNA ITS1 region
Hye Soo Kwon, Myung Sook Chung, Kyoung Hwan Joo
Korean J Parasitol 2001;39(1):43-48.
Published online March 31, 2001
DOI: https://doi.org/10.3347/kjp.2001.39.1.43

We have studied the genetic differences among four isolates of Trichinella including a new strain of Trichinella spiralis (ISS 623) recently found from a human case who took a badger in Korea. Because they have a different host origin and came from geographically separated regions, we supposed the genetic pattern of the isolates might be different as had been previously reported. It was analysed by PCR-RFLP analysis of the rDNA repeat that can readily distinguish a species or strain from others. Isolated genomic DNA of each isolate of Trichinella larvae was amplified with ITS1 specific primers and digested with restriction endonucleases. The PCR product of ITS1 was confirmed using Southern blot analysis to be a 910 bp fragment. The restriction fragments of each isolate had variable patterns when it was digested with Rsa I only. According to the RFLP patterns, the estimated genetic divergence between each isolate was different. In conclusion, four isolates of Trichinella including a new strain of T. spiralis obtained from a Korean patient may have genetic differences in the ITS1 region and the Shanghai isolate was genetically more similar to the Japanese unknown isolate than others in the ITS1 region.

Citations

Citations to this article as recorded by  Crossref logo
  • The dynamics of Trichinella spiralis epidemiology: Out to pasture?
    K.D. Murrell
    Veterinary Parasitology.2016; 231: 92.     CrossRef
  • The Fifth Outbreak of Trichinosis in Korea
    Ji-Young Rhee, Sung-Tae Hong, Hye-Jung Lee, Min Seo, Suk-Bae Kim
    The Korean Journal of Parasitology.2011; 49(4): 405.     CrossRef
  • Molecular identification of three Trichinella isolates from Heilongjiang Province, People’s Republic of China
    Yixin Lu, Caixia Han, Jinyu Yang, Xiaoyun Li, Mingxin Song
    Experimental Parasitology.2011; 129(3): 299.     CrossRef
  • Analysis of cytochrome c-oxidase (COI) gene of mitochondrial DNA from the Trichinella spp. in China
    Yurong Yang, Wei Jian, Edoardo Pozio
    Parasitology Research.2008; 103(6): 1355.     CrossRef
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