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"restriction fragment length polymorphism"

Original Articles
Molecular Detection and Phylogenetic Analysis of Anaplasma phagocytophilum in Horses in Korea
Min-Goo Seo, In-Ohk Ouh, Eunsang Choi, Oh-Deog Kwon, Dongmi Kwak
Korean J Parasitol 2018;56(6):559-565.
Published online December 31, 2018
DOI: https://doi.org/10.3347/kjp.2018.56.6.559
The identification and characterization of pathogenic and zoonotic tick-borne diseases like granulocytic anaplasmosis are essential for developing effective control programs. The differential diagnosis of pathogenic Anaplasma phagocytophilum and non-pathogenic A. phagocytophilum-like Anaplasma spp. is important for implementing effective treatment from control programs. The
objective
of the present study was to investigate the prevalence of Anaplasma spp. in horses in Korea by nucleotide sequencing and restriction enzyme fragment length polymorphism assay. Of the 627 horses included in the study, only 1 (0.2%) was infected with A. phagocytophilum. Co-infection with A. phagocytophilum- like Anaplasma spp. was not detected in the study. The 16S rRNA sequence of A. phagocytophilum was similar (99.5- 100%) to A. phagocytophilum 16S rRNA isolated from horses in other countries. PCR adapted to amplify A. phagocytophilum groEL and msp2 genes failed to generate amplicons, suggesting genetic diversity in these genes. This study is the first molecular detection of A. phagocytophilum in horses in Korea. Human granulocytic anaplasmosis and animal infection of A. phagocytophilum have been reported in Korea recently. Because of vector tick distribution, global warming, and the increase of the horse industry, horses should be considered as a potential reservoir for A. phagocytophilum, and cross infectivity should be evaluated even though a low prevalence of infection was detected in this study. Furthermore, continuous surveillance and effective control measures for A. phagocytophilum should be established to prevent disease distribution and possible transmission to humans.

Citations

Citations to this article as recorded by  Crossref logo
  • PRELIMINARY DATA ON MOLECULAR TESTING FOR ANAPLASMA PHAGOCYTOPHILUM INFECTION IN CATTLE AND HORSES, ROMANIA
    Emanuel MITREA, Andreea Monica BOGDAN , Anca Maria ZISOPOL , Ioan Liviu MITREA , Mariana IONIȚĂ
    Scientific Papers Journal VETERINARY SERIES.2024; 67(1): 24.     CrossRef
  • Worldwide meta-analysis on Anaplasma phagocytophilum infections in animal reservoirs: Prevalence, distribution and reservoir diversity
    Solomon Ngutor Karshima, Musa Isiyaku Ahmed, Kaltume Mamman Mohammed, Victoria Adamu Pam, Habiba Momoh-Abdullateef, Bulus Peter Gwimi
    Veterinary Parasitology: Regional Studies and Reports.2023; 38: 100830.     CrossRef
  • Detection and Genotypic Analysis of Anaplasma bovis and A. phagocytophilum in Horse Blood and Lung Tissue
    Min-Goo Seo, In-Ohk Ouh, Dongmi Kwak
    International Journal of Molecular Sciences.2023; 24(4): 3239.     CrossRef
  • Tick Populations and Molecular Analysis of Anaplasma Species in Ticks from the Republic of Korea
    Min-Goo Seo, Haeseung Lee, Badriah Alkathiri, KyuSung Ahn, Seung-Hun Lee, SungShik Shin, Seulgi Bae, Kyoo-Tae Kim, Min Jang, Sang-Kwon Lee, Yun Sang Cho, Kyung-Yeon Eo, Oh-Deog Kwon, Dongmi Kwak
    Microorganisms.2023; 11(4): 820.     CrossRef
  • The first study on the seroprevalence of Anaplasma spp. in small ruminants and assessment of associated risk factors in North Egypt
    Abdelfattah Selim, Kotb A. Attia, Roua A. Alsubki, Fatima Albohairy, Itoh Kimiko, Mourad Ben Said
    Veterinary World.2022; : 1221.     CrossRef
  • Molecular epidemiology of anaplasmosis in small ruminants along a human-livestock-wildlife interface in Uganda
    Keneth Iceland Kasozi, Susan Christina Welburn, Gaber El-Saber Batiha, Najat Marraiki, David Paul Nalumenya, Monica Namayanja, Kevin Matama, Kelly Katenta Zalwango, Wycliff Matovu, Gerald Zirintunda, Justine Ekou, Stellamaris Kembabazi, Claire Mack Mugasa
    Heliyon.2021; 7(1): e05688.     CrossRef
  • Synergic Effect of Adsorption and Biodegradation by Microsphere Immobilizing Bacillus velezensis for Enhanced Removal Organics in Slaughter Wastewater
    Jing Deng, Qijue Chen, Boyong Hu, Wen Li, Mingxi Jia, Yi Shi, Shouyao Xiong, Jie Bai, Huaqun Yin
    Processes.2021; 9(7): 1145.     CrossRef
  • Molecular Detection and Phylogenetic Analysis of Tick-Borne Pathogens in Ticks Collected from Horses in the Republic of Korea
    Hyun-Ji Seo, A-Tai Truong, Keun-Ho Kim, Ji-Yeon Lim, Subin Min, Heung-Chul Kim, Mi-Sun Yoo, Soon-Seek Yoon, Terry A. Klein, Yun Sang Cho
    Pathogens.2021; 10(9): 1069.     CrossRef
  • First Molecular Detection and Phylogenetic Analysis of Anaplasma phagocytophilum in Horses in Muş Province of Turkey
    Bekir OĞUZ
    Kocaeli Üniversitesi Sağlık Bilimleri Dergisi.2021; 7(3): 312.     CrossRef
  • Duplex TaqMan real-time PCR assay for simultaneous detection and quantification of Anaplasma capra and Anaplasma phagocytophilum infection
    Jinxing Song, Shanshan Zhao, Yueqin Li, Haiyan Wang, Liwei Zhang, Jun Wang, Changshen Ning, Yongshuai Peng
    Molecular and Cellular Probes.2020; 49: 101487.     CrossRef
  • Anaplasma bovis infection in a horse: First clinical report and molecular analysis
    Min-Goo Seo, Oh-Deog Kwon, Dongmi Kwak
    Veterinary Microbiology.2019; 233: 47.     CrossRef
  • Seroprevalence of Anaplasma spp. among sheep and goats in Charsadda District, Pakistan
    Adil Khan, Nasreen, Robert D. Mitchell, Sadaf Niaz, Sultan Ayaz, Irfan Khattak, Huma Naeem, Adalberto A. Pérez de León, Muhammad Arfan Zaman
    Small Ruminant Research.2019; 176: 5.     CrossRef
  • 8,549 View
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  • 11 Web of Science
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Genetic Diversity of Schistosoma haematobium Eggs Isolated from Human Urine in Sudan
Juan-Hua Quan, In-Wook Choi, Hassan Ahmed Hassan Ahmed Ismail, Abdoelohab Saed Mohamed, Hoo-Gn Jeong, Jin-Su Lee, Sung-Tae Hong, Tai-Soon Yong, Guang-Ho Cha, Young-Ha Lee
Korean J Parasitol 2015;53(3):271-277.
Published online June 30, 2015
DOI: https://doi.org/10.3347/kjp.2015.53.3.271
The genetic diversity of Schistosoma haematobium remains largely unstudied in comparison to that of Schistosoma mansoni. To characterize the extent of genetic diversity in S. haematobium among its definitive host (humans), we collected S. haematobium eggs from the urine of 73 infected schoolchildren at 5 primary schools in White Nile State, Sudan, and then performed a randomly amplified polymorphic DNA marker ITS2 by PCR-RFLP analysis. Among 73 S. haematobium egg-positive cases, 13 were selected based on the presence of the S. haematobium satellite markers A4 and B2 in their genomic DNA, and used for RFLP analysis. The 13 samples were subjected to an RFLP analysis of the S. haematobium ITS2 region; however, there was no variation in size among the fragments. Compared to the ITS2 sequences obtained for S. haematobium from Kenya, the nucleotide sequences of the ITS2 regions of S. haematobium from 4 areas in Sudan were consistent with those from Kenya (> 99%). In this study, we demonstrate for the first time that most of the S. haematobium population in Sudan consists of a pan-African S. haematobium genotype; however, we also report the discovery of Kenyan strain inflow into White Nile, Sudan.

Citations

Citations to this article as recorded by  Crossref logo
  • Analysis of DNA cox1 barcoding revealed novel haplotype in Schistosoma haematobium isolated from Western Sudan
    Ishraga Adam Elzain, Abeer Babiker Idris, Abdul Aziz Karim, Nagla Mohamed Ahmed, Salaheldein G. Elzaki, Semih Yılmaz, Mohamed A. Hassan, Hamid Suliman Abdalla
    Scientific Reports.2025;[Epub]     CrossRef
  • Molecular Detection of Urogenital Schistosomiasis in Community Level in Semi-Rural Areas in South-East Gabon
    Lady Charlène Kouna, Sandrine Lydie Oyegue-Liabagui, Chenis Nick Atiga, Chérone Nancy Mbani Mpega Ntigui, Roméo Karl Imboumy-Limoukou, Jean Claude Biteghe BI Essone, Steede Seinnat Ontoua, Diamella Nancy Moukodoum, Alain Prince Okouga, Jean Bernard Lekana
    Diagnostics.2025; 15(9): 1052.     CrossRef
  • Molecular diagnosis of urogenital schistosomiasis in pre-school children, school-aged children and women of reproductive age at community level in central Senegal
    Doudou Sow, Khadime Sylla, Ndeye Marème Dieng, Bruno Senghor, Papa Mouhamadou Gaye, Cheikh B. Fall, Ndiaw Goumballa, Aldiouma Diallo, Jean Louis A. Ndiaye, Philippe Parola, Cheikh Sokhna, Souleymane Doucouré, Babacar Faye
    Parasites & Vectors.2023;[Epub]     CrossRef
  • Population genetic structure of Schistosoma haematobium and Schistosoma haematobium × Schistosoma bovis hybrids among school-aged children in Côte d’Ivoire
    Etienne K. Angora, Alexane Vangraefschepe, Jean-François Allienne, Hervé Menan, Jean T. Coulibaly, Aboulaye Meïté, Giovanna Raso, Mirko S. Winkler, William Yavo, André O. Touré, Eliézer K. N’Goran, Jakob Zinsstag, Jürg Utzinger, Oliver Balmer, Jérôme Bois
    Parasite.2022; 29: 23.     CrossRef
  • Genetic Diversity of Schistosoma haematobium in Sub-Saharan Africa: A Systematic Review
    Rabecca Tembo, Panji Nkhoma, Mildred Zulu, Florence Mwaba, John Yabe, Hikabasa Halwiindi, Moses Kamwela, King S Nalubamba, Chummy S Sikasunge, Andrew M Phri
    University of Zambia Journal of Agricultural and Biomedical Sciences.2022;[Epub]     CrossRef
  • Detection of Schistosoma DNA in genital specimens and urine: A comparison between five female African study populations originating from S. haematobium and/or S. mansoni endemic areas
    P. Pillay, J.A. Downs, J.M. Changalucha, E.A.T. Brienen, C.E. Ramarokoto, P.D.C. Leutscher, B.J. Vennervald, M. Taylor, E.F. Kjetland, L. Van Lieshout
    Acta Tropica.2020; 204: 105363.     CrossRef
  • 11,741 View
  • 207 Download
  • 8 Web of Science
  • Crossref
Acanthamoeba sohi, n. sp., a pathogenic Korean isolate YM-4 from a freshwater fish
Kyung-il Im, Ho-Joon Shin
Korean J Parasitol 2003;41(4):181-188.
Published online December 20, 2003
DOI: https://doi.org/10.3347/kjp.2003.41.4.181

A new species of Acanthamoeba was isolated from a freshwater fish in Korea and tentatively named Acanthamoeba sp. YM-4 (Korean isolate YM-4). The trophozoites were 11.0-23.0 ?m in length and had hyaline filamentous projections. Cysts were similar to those of A. culbertsoni and A. royreba, which were previously designated as Acanthamoeba group III. Acanthamoeba YM-4 can survive at 40℃, and its generation time was 19.6 hr, which was longer than that of A. culbertsoni. In terms of the in vitro cytotoxicity of lysates, Acanthamoeba YM-4 was weaker than A. culbertsoni, but stronger than A. polyphaga. On the basis of the mortality of experimentally infected mice, Acanthamoeba YM-4 was found to be highly virulent. The isoenzymes profile of Acanthamoeba YM-4 was similar to that of A. royreba. An anti-Acanthamoeba YM-4 monoclonal antibody, McAY7, was found to react only with Acanthamoeba YM-4, and not with A. culbertsoni. Random amplified polymorphic DNA marker analysis and RFLP analysis of mitochondrial DNA and of 18S small subunit ribosomal RNA, placed Acanthamoeba YM-4 in a separate cluster on the basis of phylogenetic distances. Thus the Acanthamoeba Korean isolate YM-4 was identified as a new species, and assigned as Acanthamoeba sohi.

Citations

Citations to this article as recorded by  Crossref logo
  • Molecular evidence for trichomonads and acanthamoebae in cloacal samples of synanthropic waterfowl
    Sándor Hornok, Andor Pitó, Sándor Szekeres, Nóra Takács, Krisztina Bárdos, Gergő Keve, Yuanzhi Wang, László Ózsvári
    Parasitology Research.2025;[Epub]     CrossRef
  • Epidemiology of and Genetic Factors Associated with Acanthamoeba Keratitis
    Muhammad Ilyas, Fiona Stapleton, Mark D. P. Willcox, Fiona Henriquez, Hari Kumar Peguda, Binod Rayamajhee, Tasbiha Zahid, Constantinos Petsoglou, Nicole A. Carnt
    Pathogens.2024; 13(2): 142.     CrossRef
  • Isolates of Acanthamoeba species in the marine environment in the Philippines
    Samantha Nicole Layson, Cheilo Maurrice D. Alcala, Mikael Lorenzo Q. Avenido, Aleeza Erika M. Bayot, Charles Darwin C. Aclan, Joepher S. Barlis, Katrina D. Villacorta, Venice Marielle R. Abalos, Alyssa Nicole M. Maramba, Maricel D.C. Say, Alessandrea A. S
    Journal of Water and Health.2024; 22(9): 1695.     CrossRef
  • Biological characteristics and pathogenicity of Acanthamoeba
    Yuehua Wang, Linzhe Jiang, Yitong Zhao, Xiaohong Ju, Le Wang, Liang Jin, Ryan D. Fine, Mingguang Li
    Frontiers in Microbiology.2023;[Epub]     CrossRef
  • Species, Sequence Types and Alleles: Dissecting Genetic Variation in Acanthamoeba
    Paul A. Fuerst, Gregory C. Booton
    Pathogens.2020; 9(7): 534.     CrossRef
  • Update on Acanthamoeba phylogeny
    Daniele Corsaro
    Parasitology Research.2020; 119(10): 3327.     CrossRef
  • Molecular Phylogeny of Acanthamoeba
    Hyun Hee Kong
    The Korean Journal of Parasitology.2009; 47(Suppl): S21.     CrossRef
  • Factors Affecting the Epidemiology ofAcanthamoebaKeratitis
    Youhanna W. Ibrahim, David L. Boase, Ian A. Cree
    Ophthalmic Epidemiology.2007; 14(2): 53.     CrossRef
  • Role of the Nfa1 Protein in Pathogenic Naegleria fowleri Cocultured with CHO Target Cells
    Su-Yeon Kang, Kyoung-Ju Song, Seok-Ryoul Jeong, Jong-Hyun Kim, Sun Park, Kyongmin Kim, Myung-Hee Kwon, Ho-Joon Shin
    Clinical and Vaccine Immunology.2005; 12(7): 873.     CrossRef
  • Expression of the nfa1 Gene Cloned from Pathogenic Naegleria fowleri in Nonpathogenic N. gruberi Enhances Cytotoxicity against CHO Target Cells In Vitro
    Seok-Ryoul Jeong, Sang-Chul Lee, Kyoung-Ju Song, Sun Park, Kyongmin Kim, Myung-Hee Kwon, Kyung-il Im, Ho-Joon Shin
    Infection and Immunity.2005; 73(7): 4098.     CrossRef
  • Cloning and characterization of an immunoreactive gene encoding a calcium-binding protein from Naegleria fowleri
    Seok-Ryoul Jeong, Myung-Soo Cho, Sun Park, Kyongmin Hwang Kim, Kyoung-Ju Song, Kyung-Il Im, Ho-Joon Shin
    Molecular and Biochemical Parasitology.2004; 137(1): 169.     CrossRef
  • Decreasing effect of an anti-Nfa1 polyclonal antibody on the in vitro cytotoxicity of pathogenic Naegleria fowleri
    Seok-Ryoul Jeong, Su-Yeon Kang, Sang-Chul Lee, Kyoung-Ju Song, Kyung-il Im, Ho-Joon Shin
    The Korean Journal of Parasitology.2004; 42(1): 35.     CrossRef
  • Pathogenic free-living amoebae in Korea
    Ho-Joon Shin, Kyung-il Im
    The Korean Journal of Parasitology.2004; 42(3): 93.     CrossRef
  • 8,650 View
  • 88 Download
  • Crossref