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"sequence variation"

Brief Communication

Genetic Diversity of Toxoplasma gondii Strains from Different Hosts and Geographical Regions by Sequence Analysis of GRA20 Gene
Hong-Rui Ning, Si-Yang Huang, Jin-Lei Wang, Qian-Ming Xu, Xing-Quan Zhu
Korean J Parasitol 2015;53(3):345-348.
Published online June 30, 2015
DOI: https://doi.org/10.3347/kjp.2015.53.3.345
Toxoplasma gondii is a eukaryotic parasite of the phylum Apicomplexa, which infects all warm-blood animals, including humans. In the present study, we examined sequence variation in dense granule 20 (GRA20) genes among T. gondii isolates collected from different hosts and geographical regions worldwide. The complete GRA20 genes were amplified from 16 T. gondii isolates using PCR, sequence were analyzed, and phylogenetic reconstruction was analyzed by maximum parsimony (MP) and maximum likelihood (ML) methods. The results showed that the complete GRA20 gene sequence was 1,586 bp in length among all the isolates used in this study, and the sequence variations in nucleotides were 0-7.9% among all strains. However, removing the type III strains (CTG, VEG), the sequence variations became very low, only 0-0.7%. These results indicated that the GRA20 sequence in type III was more divergence. Phylogenetic analysis of GRA20 sequences using MP and ML methods can differentiate 2 major clonal lineage types (type I and type III) into their respective clusters, indicating the GRA20 gene may represent a novel genetic marker for intraspecific phylogenetic analyses of T. gondii.

Citations

Citations to this article as recorded by  Crossref logo
  • Effects of latent infection of Toxoplasma gondii strains with different genotypes on mouse behavior and brain transcripts
    Bei-Bei Zhou, Hong-Jie Dong, Hang Sun, Xiao-Man Xie, Huan-Huan Xie, Wen-Ju Zhu, Ya-Nan Li, Chao Xu, Jian-Ping Cao, Gui-Hua Zhao, Kun Yin
    Parasites & Vectors.2025;[Epub]     CrossRef
  • First Report on the Molecular Detection and Genetic Characterization of Toxoplasma gondii From Donkeys in Kenya
    Fredrick O. Obonyo, Ndichu Maingi, Samuel M. Githigia, Kevin O. Ochwedo, Anne A. Owiti, Evans N. Nyaboga
    Acta Parasitologica.2024; 69(3): 1480.     CrossRef
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Original Article
Sequence Variation in Superoxide Dismutase Gene of Toxoplasma gondii among Various Isolates from Different Hosts and Geographical Regions
Shuai Wang, Aiping Cao, Xun Li, Qunli Zhao, Yuan Liu, Hua Cong, Shenyi He, Huaiyu Zhou
Korean J Parasitol 2015;53(3):253-258.
Published online June 30, 2015
DOI: https://doi.org/10.3347/kjp.2015.53.3.253
Toxoplasma gondii, an obligate intracellular protozoan parasite of the phylum Apicomplexa, can infect all warm-blooded vertebrates, including humans, livestock, and marine mammals. The aim of this study was to investigate whether superoxide dismutase (SOD) of T. gondii can be used as a new marker for genetic study or a potential vaccine candidate. The partial genome region of the SOD gene was amplified and sequenced from 10 different T. gondii isolates from different parts of the world, and all the sequences were examined by PCR-RFLP, sequence analysis, and phylogenetic reconstruction. The results showed that partial SOD gene sequences ranged from 1,702 bp to 1,712 bp and A + T contents varied from 50.1% to 51.1% among all examined isolates. Sequence alignment analysis identified total 43 variable nucleotide positions, and these results showed that 97.5% sequence similarity of SOD gene among all examined isolates. Phylogenetic analysis revealed that these SOD sequences were not an effective molecular marker for differential identification of T. gondii strains. The research demonstrated existence of low sequence variation in the SOD gene among T. gondii strains of different genotypes from different hosts and geographical regions.

Citations

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  • Superoxide Dismutases in Immune Regulation and Infectious Diseases
    Tong Liu, Jiajin Shang, Qijun Chen
    Antioxidants.2025; 14(7): 809.     CrossRef
  • Immunization with a DNA vaccine encoding Toxoplasma gondii Superoxide dismutase (TgSOD) induces partial immune protection against acute toxoplasmosis in BALB/c mice
    Yuan Liu, Aiping Cao, Yawen Li, Xun Li, Hua Cong, Shenyi He, Huaiyu Zhou
    BMC Infectious Diseases.2017;[Epub]     CrossRef
  • 10,341 View
  • 102 Download
  • 2 Web of Science
  • Crossref