Skip to main navigation Skip to main content
  • KSPTM
  • E-Submission

PHD : Parasites, Hosts and Diseases

OPEN ACCESS
ABOUT
BROWSE ARTICLES
FOR CONTRIBUTORS

Page Path

2
results for

"whole genome sequencing"

Article category

Keywords

Publication year

Authors

"whole genome sequencing"

Case Report

Isolation and whole-genome characterization of Coxiella burnetii from an acute Q fever patient in Korea
Yejin Choi, Dayoung Kim, Yeon-Joo Choi, Sun-Woo Choi, Da-Eun Jeong, Jeong Yoon Lee, Nam-Hyuk Cho, Kwang-Jun Lee, Dong-Min Kim, Won-Jong Jang, Jun-Gu Kang
Received January 12, 2026  Accepted June 1, 2026  Published online August 28, 2026  
DOI: https://doi.org/10.3347/PHD.26005    [Epub ahead of print]
Coxiella burnetii is an environmentally stable intracellular bacterium responsible for severe global outbreaks of the zoonotic disease, Q fever. Q fever is transmitted by the inhalation of aerosols contaminated with the birth products and excretions of infected animals, mainly of sheep and goats. A 28-year-old cattle raiser presented with headache and fever without a significant medical history, although his cattle herd had previously been diagnosed with brucellosis. He spent time outdoors but reported no tick bites or eschar. Initial evaluation revealed mild thrombocytopenia and elevated aspartate aminotransferase, alanine aminotransferase, and C-reactive protein levels. On day 2 after disease onset, his blood tested positive for the IS1111 gene of C. burnetii by nested PCR. After amplifying C. burnetii in severe combined immunodeficient mice, the pathogen was isolated using a cell culture system. The isolated CH12 strain was confirmed via PCR, nucleotide sequence analysis, and whole-genome sequencing. This study reports a case of acute Q fever in Korea, in which C. burnetii was isolated and characterized using whole-genome sequencing.
  • 425 View
  • 23 Download
Brief Communication
Whole Mitochondrial Genome Sequence of an Indian Plasmodium falciparum Field Isolate
Suchi Tyagi, Veena Pande, Aparup Das
Korean J Parasitol 2014;52(1):99-103.
Published online February 19, 2014
DOI: https://doi.org/10.3347/kjp.2014.52.1.99

Mitochondrial genome sequence of malaria parasites has served as a potential marker for inferring evolutionary history of the Plasmodium genus. In Plasmodium falciparum, the mitochondrial genome sequences from around the globe have provided important evolutionary understanding, but no Indian sequence has yet been utilized. We have sequenced the whole mitochondrial genome of a single P. falciparum field isolate from India using novel primers and compared with the 3D7 reference sequence and 1 previously reported Indian sequence. While the 2 Indian sequences were highly divergent from each other, the presently sequenced isolate was highly similar to the reference 3D7 strain.

Citations

Citations to this article as recorded by  Crossref logo
  • Global-scale population genetic analysis of Plasmodium falciparum identifies region-specific patterns of malaria parasite adaptation
    Nina Billows, Jamille G. Dombrowski, Joseph Thorpe, Leen Vanheer, Sophie Moss, Jesse Gitaka, Colin J. Sutherland, Claudio R. F. Marinho, Nguyen Thi Hong Ngoc, Nguyen Thi Huong Binh, Nguyen Quang Thieu, Susana Campino, Taane G. Clark
    Nature Communications.2026;[Epub]     CrossRef
  • Preventing malaria by administering a monoclonal antibody
    PRAGYAN ACHARYA
    The National Medical Journal of India.2025; 37: 259.     CrossRef
  • Long-read DNA sequencing reveals the organization of the mitochondrial genome in the early-branching dinoflagellate Oxyrrhis marina.
    Ronie Haro, Nikita Walunjkar, Soham Jorapur, Claudio H. Slamovits
    Protist.2024; 175(6): 126071.     CrossRef
  • Striking Diversity of Mitochondria-Specific Translation Processes across Eukaryotes
    Florent Waltz, Philippe Giegé
    Trends in Biochemical Sciences.2020; 45(2): 149.     CrossRef
  • Mitochondrial Inheritance in Phytopathogenic Fungi—Everything Is Known, or Is It?
    Hector Mendoza, Michael H. Perlin, Jan Schirawski
    International Journal of Molecular Sciences.2020; 21(11): 3883.     CrossRef
  • Mitochondrial population genomic analyses reveal population structure and demography of Indian Plasmodium falciparum
    Suchi Tyagi, Aparup Das
    Mitochondrion.2015; 24: 9.     CrossRef
  • New insights into the evolutionary history of Plasmodium falciparum from mitochondrial genome sequence analyses of Indian isolates
    Suchi Tyagi, Veena Pande, Aparup Das
    Molecular Ecology.2014; 23(12): 2975.     CrossRef
  • Mitochondrial genome sequence diversity of Indian Plasmodium falciparum isolates
    Suchi Tyagi, Veena Pande, Aparup Das
    Memórias do Instituto Oswaldo Cruz.2014; 109(4): 494.     CrossRef
  • 14,694 View
  • 115 Download
  • 9 Web of Science
  • Crossref