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Molecular detection of Bartonella species and Coxiella endosymbiont in human-biting Haemaphysalis longicornis ticks in Korea


Published online: July 2, 2026

1Premedical Science, College of Medicine, Chosun University, Gwangju, Korea

2Department of Internal Medicine, College of Medicine, Chosun University, Gwangju, Korea

*Correspondence: drongkim@chosun.ac.kr

These authors contributed equally to this work.


Citation Kim CM, Panchali MJL, Lee YM, Yun NR, Kim DM. Molecular detection of Bartonella species and Coxiella endosymbiont in human-biting Haemaphysalis longicornis ticks in Korea. Parasites Hosts Dis [Epub ahead of print].

• Received: February 9, 2026   • Accepted: March 9, 2026

© 2026, Korean Society for Parasitology and Tropical Medicine

This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

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  • Bartonella species are vector-borne pathogens that infect a wide range of hosts, including humans. Although several Bartonella species have been identified in rodents and arthropods in Korea, information on Bartonella detection in ticks removed from human patients remains limited. This study investigated the presence of Bartonella species DNA in human-biting ticks collected in Korea and screened for other tick-associated bacteria, including Coxiella endosymbiont. From January to December 2018, 35 ticks were removed from 29 tick-bitten patients in Jeollanam-do and Gwangju, Korea. Ticks were identified morphologically and molecularly by 16S rRNA gene PCR. The presence of Bartonella species was assessed using nested PCR targeting the 16S-23S internal transcribed spacer (ITS) region. The ticks were identified as Haemaphysalis longicornis (17/35, 48.6%), Amblyomma testudinarium (14/35, 40.0%), and Ixodes nipponensis (4/35, 11.4%). Two H. longicornis ticks tested positive for Bartonella species. Sequencing revealed 99.5% identity with B. bacilliformis isolate GJRITS124 in one tick and 98.9% identity with B. taylorii isolate 190731_HC2 in the other, both previously identified in Apodemus agrarius rodents in Korea. One B. bacilliformis-positive tick was also positive for Coxiella spp., and sequence analysis indicated a Coxiella endosymbiont showing 100.0% identity with the Coxiella-like endosymbiont strain 580. Phylogenetic analysis supported these findings; however, bacterial cultures from PCR-positive tick lysates were negative. This study provides baseline evidence of B. bacilliformis and B. taylorii, as well as Coxiella endosymbiont DNA in human-biting H. longicornis ticks in Korea and highlights the need for continued surveillance.
Ectoparasites, such as ticks, are prominent vectors of numerous infectious diseases, including those caused by bacteria, viruses, and protozoans. Ticks are haematophagous arthropods, and their ability to acquire and maintain pathogens is influenced by complex tick-pathogen interactions and vector competence-related mechanisms [1]. However, for Bartonella species, the role of ticks as vectors remains uncertain and has not been conclusively demonstrated. Bartonella species are zoonotic bacteria present in various mammals, including rodents, cats, ruminants, and humans [2]. Although several studies have suggested possible tick-associated transmission, their role as definitive vectors remains controversial [3]. Molecular surveys have detected Bartonella DNA in multiple tick genera, including Haemaphysalis and Ixodes across different geographic regions [4,5]. However, direct transmission of Bartonella species from ticks to mammalian hosts has not been conclusively demonstrated [3]. Among Bartonella species, B. bacilliformis is a human-pathogenic organism typically associated with sandfly transmission, whereas B. taylorii is mainly maintained in rodent-flea cycles [6,7]. The involvement of ticks in the ecology of these species has not been established.
In East Asia, Bartonella DNA has been detected in ticks, including H. longicornis, collected in China, indicating that this tick species can harbor Bartonella in the region [5]. In Korea, multiple Bartonella species, including B. grahamii, B. henselae, B. taylorii, B. tribocorum, and B. phoceensis, have been identified in Apodemus agrarius rodents [8]. Additionally, H. longicornis, a dominant tick species in East Asia, is known to transmit several pathogens, including Rickettsia, Anaplasma, and severe fever with thrombocytopenia syndrome virus [5,9-11]. Given the increasing reports of Bartonella species in ticks globally, it is crucial to investigate their potential involvement in the transmission of Bartonella species. Understanding the interaction between Bartonella species and their potential tick vectors is critical for evaluating the epidemiological impact of tick-borne Bartonella infections. Therefore, this study investigated the molecular detection of Bartonella species DNA in ticks removed from human patients in Korea and performed additional screening PCR assays for other tick-associated pathogens, including Rickettsia spp., Orientia tsutsugamushi, Anaplasma spp., and Coxiella spp., to evaluate their occurrence at the human–tick interface.
Between January and December 2018, ticks removed from humans in Jeollanam-do and Gwangju, Korea, were collected during routine clinical care for tick-bitten patients at Chosun University Hospital, and sampling was based on clinical presentation rather than a predefined geographic or temporal survey design. The study was approved by the Ethics in Human Research Committee of Chosun University Hospital under an institutional review board that approves all experiments involving ticks and tick-bitten humans (No. CHOSUN 2013-10-001-018). Ticks were morphologically identified to the species and developmental stage (adult female, adult male, nymph, or larva) using standard taxonomic parameters and morphological features under a microscope [12]. Each identified tick was individually processed and subjected to molecular identification using conventional PCR (C-PCR) targeting mitochondrial 16S rRNA [13].
Ticks at all developmental stages were washed in 70% ethanol and rinsed twice with sterile phosphate-buffered saline. Each tick was transferred to a hard tissue grinding MK28 tube (Bertin Technology) containing 800 μl of phosphate-buffered saline with 1× PC/SM (penicillin and streptomycin), ground using a FastPrep-24 Classic instrument (MP Biomedicals), and then stored at -80°C until DNA extraction. For DNA extraction, 150 µl of the homogenized tick lysate was mixed with 150 µl ATL buffer and 20 µl proteinase K and incubated at 56°C overnight for lysis; genomic DNA was extracted using the QIAamp Tissue & Blood Mini Kit (Qiagen) according to the manufacturer’s instructions.
PCR amplification was performed using target-specific primers and AmpliTaq Gold 360 Master Mix (Applied Biosystems) on an AB thermal cycler (Applied Biosystems). The 16S-23S internal transcribed spacer (ITS) region was targeted for detection of Bartonella species [8], and PCR reactions included positive controls (B. henselae DNA) and negative controls (molecular-grade water). Additional screening PCR assays were performed for Rickettsia spp., Orientia tsutsugamushi, Anaplasma spp., and Coxiella spp. using previously described primers and conditions (Supplementary Table S1) [8,13-17]. For nested PCR, the reaction mixture was identical to that used for C-PCR, except that the first PCR product was used as template DNA with nested PCR primers, and the screening results are presented in Table 1.
The amplified PCR products were purified using the QIAquick PCR Purification Kit (Qiagen) and sequenced with PCR primers (Solgent). Obtained sequences were compared with GenBank database entries using the Basic Local Alignment Search Tool (BLAST) provided by the National Center for Biotechnology Information and aligned using Lasergene version 8 (DNASTAR). Phylogenetic trees were constructed by the neighbor-joining method based on ClustalW alignments using the MegAlign program (DNASTAR). Bootstrap analysis (1,000 replicates) was performed using the Kimura 2-parameter model. Pairwise alignments were performed with an open-gap penalty of 10 and a gap extension penalty of 0.5. Bacterial culture of Bartonella species PCR-positive tick lysates was performed on heart infusion agar blood plates using 200 μl of the homogenized tick lysate [18].
All ticks examined in this study were fed or partially fed ticks that had been removed from human patients during clinical visits. From 29 tick-bitten patients, a total of 35 ticks were obtained, of which 19 ticks (54.3%) were adults, including 16 (45.7%) females and 3 males (8.6%). Thirteen ticks (37.1%) were nymphs, and 3 (8.6%) were larvae based on morphological examination using a microscope for tick identification. The ticks were identified as H. longicornis (17 ticks, 48.6%; 12 adult females, 2 nymphs, and 3 larvae), Amblyomma testudinarium (14 ticks, 40.0%; 3 adult males and 11 nymphs), and Ixodes nipponensis (4 ticks, 11.4%; 4 adult females), as described in Table 2. Tick identification using 16S rDNA C-PCR and DNA sequencing yielded the same results as microscopic examination (Table 2).
A total of 35 ticks were examined for the detection of Bartonella species using Bartonella-specific 16S-23S ITS nested PCR. Among these, 2 ticks (2 out of 35, 5.7%) tested positive for Bartonella species. Both Bartonella-positive ticks were identified as H. longicornis (Table 1; Supplementary Fig. S1). The positive PCR products were sequenced, and the resulting sequences were aligned with reference sequences obtained from the GenBank database to identify known sequences with a high degree of similarity using ClustalW. The DNA sequence analysis revealed the presence of B. taylorii in tick 1 and B. bacilliformis in tick 2. Homology testing showed that the B. taylorii-positive tick 1 exhibited 98.9% identity with B. taylorii isolate 190731_HC2 (GenBank accession No. OR288191.1), and the B. bacilliformis-positive tick 2 exhibited 99.5% identity with B. bacilliformis isolate GJRITS124 (GenBank accession No. PQ888831.1), both previously identified in A. agrarius rodents in Korea. A phylogenetic tree was constructed based on the alignment of 16S–23S ITS sequences obtained from the 2 Bartonella-positive H. longicornis ticks together with reference Bartonella sequences retrieved from GenBank. In the phylogenetic analysis, the sequence from tick 1 clustered with B. taylorii, whereas the sequence from tick 2 clustered with B. bacilliformis (Fig. 1), supporting the species identification based on sequence similarity. The 16S–23S ITS nested PCR product sequences generated in this study were deposited in the GenBank database under accession numbers PX864259 (B. taylorii, tick 1) and PX864260 (B. bacilliformis, tick 2).
No DNA of Rickettsia spp., O. tsutsugamushi, or Anaplasma spp. was detected in any of the examined ticks. One tick (tick 2) tested positive by PCR for Coxiella spp.; however, sequence analysis indicated that this signal corresponded to a Coxiella endosymbiont rather than Coxiella burnetii (Table 1). Homology analysis demonstrated that the Coxiella endosymbiont–positive tick 2 exhibited 100.0% identity with the Coxiella-like endosymbiont strain 580 chromosome (GenBank accession No. CP084737.1). The partial 16S rRNA gene sequence of the Coxiella endosymbiont detected in H. longicornis tick 2 was deposited in the GenBank database under accession number PZ039301 (Coxiella endosymbiont, tick 2). A phylogenetic tree based on the partial 16S rRNA sequence obtained from the Coxiella endosymbiont-positive tick 2 was constructed with reference sequences from GenBank, and the sequence clustered with Coxiella endosymbionts (Fig. 2). No viable Bartonella colonies were obtained from PCR-positive tick lysates, indicating the difficulty of isolating viable Bartonella organisms from tick vectors under the culture conditions used.
Detection of B. bacilliformis and B. taylorii DNA and Coxiella endosymbiont DNA in human-biting H. longicornis ticks demonstrates the presence of tick-associated bacterial DNA at the human-tick interface in Korea. However, molecular detection alone does not demonstrate transmission by ticks. Previous studies have also detected Bartonella DNA in various tick genera worldwide [4,5], indicating that ticks may harbor the organism under natural conditions [4].
Phylogenetic analysis showed that the Bartonella sequences detected in human-biting ticks were closely related to strains previously reported from A. agrarius rodents in Korea, showing 99.5% identity for B. bacilliformis and 98.9% identity for B. taylorii. These findings suggest that the Bartonella DNA detected in ticks removed from human patients showed sequence similarity to strains previously detected in rodents in Korea. However, the ecological or epidemiological relationships among rodents, ticks, and humans cannot be determined based solely on the molecular data obtained in this study.
The 2 Bartonella-positive H. longicornis ticks were collected from different patients. One tick (tick 1) positive for B. taylorii was removed from a patient (2018-Lee01) who presented solely for tick removal without fever or other systemic symptoms suggestive of bartonellosis. The other tick (tick 2), which tested positive for B. bacilliformis, was removed from a different patient (2018-505) who presented with fever; however, no clinical features characteristic of bartonellosis, such as Oroya fever, verruga peruana, endocarditis, or lymphadenopathy, were identified during clinical evaluation. No laboratory or clinical evidence of confirmed human Bartonella infection was documented in either patient.
One possible explanation for this sequence similarity is that the detected Bartonella DNA may have originated from the blood meal of infected rodent hosts, such as A. agrarius, rather than reflecting active infection or transmission by the tick, as previous studies have emphasized that detection of Bartonella DNA in ticks does not necessarily indicate vector competence [3]. Consistent with this interpretation, bacterial cultures of PCR-positive tick lysates were negative in this study, further illustrating the difficulty of isolating viable Bartonella organisms and highlighting the limitations of current culture-based approaches.
This study has several limitations, including the relatively small number of ticks examined, the restriction of sampling to a single year, and the clinical-based consecutive collection of ticks from patients at a single hospital, which limits epidemiological interpretation. Nevertheless, previous studies in Korea have reported the presence of Bartonella DNA in various tick species and rodents, and human infections have also been reported, supporting the zoonotic relevance of these organisms [4,19]. Similar molecular findings from other regions, including the detection of B. taylorii in rodent species such as A. flavicollis, A. sylvaticus, and Clethrionomys glareolus in Slovenia, indicate that these pathogens occur across diverse geographic settings and host species [20]. Future studies incorporating quantitative PCR to estimate bacterial load, multilocus sequence typing, or metagenomic approaches would help further validate species identification and provide a more comprehensive understanding of Bartonella diversity detected in human-biting ticks.
In conclusion, this study provides baseline evidence for the presence of B. bacilliformis and B. taylorii, as well as Coxiella endosymbiont DNA in H. longicornis ticks removed from human patients in Korea. The findings are limited to molecular detection in a small number of fed ticks and do not demonstrate transmission by ticks. These results provide baseline detection data for tick-associated bacterial DNA, including Bartonella and Coxiella endosymbiont, in human-biting ticks in Korea and support further studies to clarify the ecological relevance of these findings in human exposure settings.

Data availability

Data and materials are available upon request to the corresponding author.

Author contributions

Conceptualization: Kim DM. Data curation: Kim CM, Lee YM. Formal analysis: Kim CM, Panchali MJL. Funding acquisition: Kim DM. Investigation: Kim CM, Panchali MJL, Lee YM. Methodology: Lee YM. Project administration: Kim DM. Resources: Lee YM, Yun NR. Supervision: Kim DM, Yun NR. Validation: Kim CM, Panchali MJL. Visualization: Lee YM, Yun NR. Writing - original draft: Kim CM, Panchali MJL. Writing - review & editing: Kim DM, Kim CM, Panchali MJL.

Conflict of interest

The authors have no conflicts of interest to declare.

Funding

This study was supported by a research fund from Chosun University Hospital (2025).

Supplementary material is available with this article at https://doi.org/10.3347/PHD.26010.
Fig. 1.
Phylogenetic tree constructed based on partial 16S–23S internal transcribed spacer (ITS) sequences of the Bartonella spp. detected in 2 Haemaphysalis longicornis ticks (tick 1 and tick 2) removed from human patients in Korea (▶), together with reference Bartonella sequences retrieved from the GenBank database. The phylogenetic tree was constructed using the neighbor-joining method. Bootstrap values based on 1,000 replicates are shown at the branch nodes.The scale bar represents 0.05 nucleotide substitutions per site. GenBank accession numbers are indicated for all reference sequences. Host and country information for the reference sequences are provided. For some reference sequences retrieved from GenBank, information on the host and/or country of origin was not available in the original database records.
PHD-26010f1.jpg
Fig. 2.
Phylogenetic tree constructed based on partial 16S rRNA gene sequences of the Coxiella endosymbiont detected in a Haemaphysalis longicornis tick (tick 2) removed from human patients in Korea (▶), together with reference sequences of Coxiella burnetii and Coxiella endosymbionts retrieved from the GenBank database. The phylogenetic tree was constructed using the neighbor-joining method. Bootstrap values based on 1,000 replicates are shown at the branch nodes. The scale bar represents 0.01 nucleotide substitutions per site. GenBank accession numbers are indicated for all reference sequences.
PHD-26010f2.jpg
Table 1.
Identification of ticks and detection of tick-borne pathogens in ticks collected from human patients
Table 1.
Tick No. Tick species Tick developmental stage Rickettsia spp. Orientia tsutsugamushi Anaplasma spp. Coxiella spp. Bartonella spp.
ompA 56 kDa groEL ankA 16S rRNA IS1111 ITS
Tick 1 Haemaphysalis longicornis Adult female - - - - - - Bartonella taylorii
Tick 2 H. longicornis Adult female - - - - Coxiella endosymbiont - Bartonella bacilliformis

ompA, outer membrane protein A gene; 56 kDa, 56-kDa type-specific antigen gene; groEL, heat shock protein gene; ankA, ankyrin-related protein gene; 16S rRNA, 16S ribosomal RNA gene; IS1111, htpAB-associated repetitive element; ITS, 16S-23S internal transcribed spacer region; -, not detected.

Table 2.
16S rDNA-targeting conventional PCR and morphological identification of ticks collected from patients
Table 2.
Development stage/tick species Haemaphysalis longicornis Amblyomma testudinarium Ixodes nipponensis Species total
 Adult female 12 (70.6) 0 (0) 4 (100) 16 (45.7)
 Adult male 0 (0) 3 (21.4) 0 (0) 3 (8.6)
 Nymph 2 (11.8) 11 (78.6) 0 (0) 13 (37.1)
 Larva 3 (17.6) 0 (0) 0 (0) 3 (8.6)
Stage total 17 (48.6) 14 (40.0) 4 (11.4) 35 (100)

Values are presented as number (%).

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Molecular detection of Bartonella species and Coxiella endosymbiont in human-biting Haemaphysalis longicornis ticks in Korea
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Fig. 1. Phylogenetic tree constructed based on partial 16S–23S internal transcribed spacer (ITS) sequences of the Bartonella spp. detected in 2 Haemaphysalis longicornis ticks (tick 1 and tick 2) removed from human patients in Korea (▶), together with reference Bartonella sequences retrieved from the GenBank database. The phylogenetic tree was constructed using the neighbor-joining method. Bootstrap values based on 1,000 replicates are shown at the branch nodes.The scale bar represents 0.05 nucleotide substitutions per site. GenBank accession numbers are indicated for all reference sequences. Host and country information for the reference sequences are provided. For some reference sequences retrieved from GenBank, information on the host and/or country of origin was not available in the original database records.
Fig. 2. Phylogenetic tree constructed based on partial 16S rRNA gene sequences of the Coxiella endosymbiont detected in a Haemaphysalis longicornis tick (tick 2) removed from human patients in Korea (▶), together with reference sequences of Coxiella burnetii and Coxiella endosymbionts retrieved from the GenBank database. The phylogenetic tree was constructed using the neighbor-joining method. Bootstrap values based on 1,000 replicates are shown at the branch nodes. The scale bar represents 0.01 nucleotide substitutions per site. GenBank accession numbers are indicated for all reference sequences.
Molecular detection of Bartonella species and Coxiella endosymbiont in human-biting Haemaphysalis longicornis ticks in Korea
Tick No. Tick species Tick developmental stage Rickettsia spp. Orientia tsutsugamushi Anaplasma spp. Coxiella spp. Bartonella spp.
ompA 56 kDa groEL ankA 16S rRNA IS1111 ITS
Tick 1 Haemaphysalis longicornis Adult female - - - - - - Bartonella taylorii
Tick 2 H. longicornis Adult female - - - - Coxiella endosymbiont - Bartonella bacilliformis
Development stage/tick species Haemaphysalis longicornis Amblyomma testudinarium Ixodes nipponensis Species total
 Adult female 12 (70.6) 0 (0) 4 (100) 16 (45.7)
 Adult male 0 (0) 3 (21.4) 0 (0) 3 (8.6)
 Nymph 2 (11.8) 11 (78.6) 0 (0) 13 (37.1)
 Larva 3 (17.6) 0 (0) 0 (0) 3 (8.6)
Stage total 17 (48.6) 14 (40.0) 4 (11.4) 35 (100)
Table 1. Identification of ticks and detection of tick-borne pathogens in ticks collected from human patients

ompA, outer membrane protein A gene; 56 kDa, 56-kDa type-specific antigen gene; groEL, heat shock protein gene; ankA, ankyrin-related protein gene; 16S rRNA, 16S ribosomal RNA gene; IS1111, htpAB-associated repetitive element; ITS, 16S-23S internal transcribed spacer region; -, not detected.

Table 2. 16S rDNA-targeting conventional PCR and morphological identification of ticks collected from patients

Values are presented as number (%).